I have just (i.e. last friday) been through the whole course material once
again, for the exam tomorrow. Or rather, I *tried* to go through the whole
course material, because several links, especially in the early sections,
have gone bad in the meantime. I enclose a list of all problems I
encountered.
Best regards,
Henrik
PS (I know this is rather late, but I had a problem with my
subscription when I tried to mail this last Friday.
Sorry if you get this mail twice...)
------------------------------------------------------------
Section 2:
Tutorial on the Amino Acids, by PPS Consultant Alan Ward
http://monera.ncl.ac.uk/protein/aa.html
- server down or unreachable
Here is a useful directory of amino acid properties (and a text
version)
by Ronald C. Beavis and David
Fenyo, Skirball Institute Protein Chemistry Laboratory
http://128.122.10.5/aainfo/contents.htm
- server down or unreachable
Chirality of Aminoacids - the chemist's view by Luis P. Candeias
http://www.graylab.ac.uk/usr/candeias/chiral/chiral.html
- "The page or section that you are trying to find has now been
deleted."
Section 4:
DNA and the Central Dogma of Life
http://galaxy.einet.net/galaxy/Science/Chemistry/vineet-gupta/home.html
- "Page not found..."
The Search for DNA
http://esg-www.mit.edu:8001/esgbio/dogma/old/dna.html
- all figures have disappeared
Rasmol exercise on DNA structure
http://www.strath.ac.uk/Departments/BioSci/PPS/Helixras.htm
- "File Not Found"
Elements of Transcription
http://www.strath.ac.uk/Departments/BioSci/PPS/Transndx.htm
- "File Not Found"
Section 9:
In "Principles of Packing of Protein Secondary Structures":
Volumes of Amino Acid Residues by Ronald C. Beavis and David Fenyo
http://prowl.rockefeller.edu//aainfo/volume.htm
- "Not Found"
Section 10:
CATH
http://www.biochem.ucl.ac.uk/bsm/cath/CATHintro.html
- "We are sorry, but this link is out of date - please use the URL
http://www.biochem.ucl.ac.uk/bsm/cath instead."
Section 12:
In "Gene Regulating Proteins"
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/genereg.html)
The lac repressor , by Henry Brzeski, Dept of Bioscience and
Biotechnology,
University of Strathclyde
http://www.strath.ac.uk/Departments/BioSci/PPS/Lacreprs.htm
- "File Not Found"
In "Gene Regulating Proteins" /
"Homeodomain DNA Binding Proteins" /
"Important DNA-protein Contacts"
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/homeodom/a_cont.html):
It would be useful to view some of the more important
individual amino acids' contributions in detail.
http://pps98.cryst.bbk.ac.uk/ppscore/section12/homeodom/a_detail.htm
- "Not Found"
In "Enzymes":
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/enzymes.html)
Adventures with Acetylcholinesterase by Maja Kricker, The National
Institute of
Environmental Health Sciences
http://enterprise.niehs.nih.gov/ACE.html
- server down or unreachable
-- +---------------------------------------------------------------------+ | Henrik Nielsen, hnielsen@cbs.dtu.dk | | CBS - Center for Biological Sequence Analysis | | IBT - Department of Biotechnology | | DTU - Technical University of Denmark, Bldg 208, DK-2800 Lyngby | | phone: (+45) 4525 2470, fax: (+45) 4593 1585 | | home phone: (+45) 35 39 93 87 | +---------------------------------------------------------------------+