Missing links

Henrik Nielsen (hnielsen@rna.cbs.dtu.dk)
Wed, 23 Sep 1998 10:33:22 +0200 (MDT)

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Dear organisers,

I have just (i.e. last friday) been through the whole course material once
again, for the exam tomorrow. Or rather, I *tried* to go through the whole
course material, because several links, especially in the early sections,
have gone bad in the meantime. I enclose a list of all problems I
encountered.

Best regards,
Henrik

PS (I know this is rather late, but I had a problem with my
subscription when I tried to mail this last Friday.
Sorry if you get this mail twice...)

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Section 2:

Tutorial on the Amino Acids, by PPS Consultant Alan Ward
http://monera.ncl.ac.uk/protein/aa.html
- server down or unreachable

Here is a useful directory of amino acid properties (and a text
version)
by Ronald C. Beavis and David
Fenyo, Skirball Institute Protein Chemistry Laboratory
http://128.122.10.5/aainfo/contents.htm
- server down or unreachable

Chirality of Aminoacids - the chemist's view by Luis P. Candeias
http://www.graylab.ac.uk/usr/candeias/chiral/chiral.html
- "The page or section that you are trying to find has now been
deleted."

Section 4:

DNA and the Central Dogma of Life
http://galaxy.einet.net/galaxy/Science/Chemistry/vineet-gupta/home.html
- "Page not found..."

The Search for DNA
http://esg-www.mit.edu:8001/esgbio/dogma/old/dna.html
- all figures have disappeared

Rasmol exercise on DNA structure
http://www.strath.ac.uk/Departments/BioSci/PPS/Helixras.htm
- "File Not Found"

Elements of Transcription
http://www.strath.ac.uk/Departments/BioSci/PPS/Transndx.htm
- "File Not Found"

Section 9:

In "Principles of Packing of Protein Secondary Structures":
Volumes of Amino Acid Residues by Ronald C. Beavis and David Fenyo
http://prowl.rockefeller.edu//aainfo/volume.htm
- "Not Found"

Section 10:

CATH
http://www.biochem.ucl.ac.uk/bsm/cath/CATHintro.html
- "We are sorry, but this link is out of date - please use the URL
http://www.biochem.ucl.ac.uk/bsm/cath instead."

Section 12:

In "Gene Regulating Proteins"
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/genereg.html)
The lac repressor , by Henry Brzeski, Dept of Bioscience and
Biotechnology,
University of Strathclyde
http://www.strath.ac.uk/Departments/BioSci/PPS/Lacreprs.htm
- "File Not Found"

In "Gene Regulating Proteins" /
"Homeodomain DNA Binding Proteins" /
"Important DNA-protein Contacts"
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/homeodom/a_cont.html):
It would be useful to view some of the more important
individual amino acids' contributions in detail.
http://pps98.cryst.bbk.ac.uk/ppscore/section12/homeodom/a_detail.htm
- "Not Found"

In "Enzymes":
(http://pps98.cryst.bbk.ac.uk/ppscore/section12/enzymes.html)
Adventures with Acetylcholinesterase by Maja Kricker, The National
Institute of
Environmental Health Sciences
http://enterprise.niehs.nih.gov/ACE.html
- server down or unreachable

--
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| Henrik Nielsen, hnielsen@cbs.dtu.dk                                 |
| CBS - Center for Biological Sequence Analysis                       |
| IBT - Department of Biotechnology                                   |
| DTU - Technical University of Denmark, Bldg 208, DK-2800 Lyngby     |
| phone: (+45) 4525 2470, fax: (+45) 4593 1585                        |
| home phone: (+45) 35 39 93 87                                       |
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